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View Structure Prediction Details

Protein: adt-2
Organism: Caenorhabditis elegans
Length: 125 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for adt-2.

Description E-value Query
Range
Subject
Range
gi|68371668 - gi|68371668|ref|XP_689968.1| PREDICTED: similar to thrombospondin [Danio rerio]
147.0 [0..2] [123..1602]

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Predicted Domain #1
Region A:
Residues: [1-125]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASSEQQFC NEQACASSSA NDWGTWSGWS QCSVSCGAGV KRRTRTCRTG NCPGNYKESA  60
   61 ICNDRDCENK NAAWGGWGYW SSCSETCGDG VRKRVRKCYG SGNCDGQQYE KQYCNLRVCD 120
  121 FRRKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 1w0rA
Description: Solution structure of dimeric form of properdin by X-ray solution scattering and analytical ultracentrifugation
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle