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View Structure Prediction Details

Protein: CE33988
Organism: Caenorhabditis elegans
Length: 534 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33988.

Description E-value Query
Range
Subject
Range
gi|109503148, gi... - gi|169642770|gb|AAI60899.1| Glycosyltransferase 25 domain containing 1 [Rattus norvegicus], gi|15782...
339.0 [0..19] [533..31]

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Predicted Domain #1
Region A:
Residues: [1-349]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFLHCLLL FHVFLSSWAL FPGAEPDEGD VRHIYPPVYI GVGLGEHAHA IPYFLGWLEN  60
   61 LDYPKDRIKV EIFILSKEDA TIHQVKWWLD STKQYFKSVK IIEESENWLE SGLRNARLQK 120
  121 VERCLLISGD TVPTEMNLIQ FLFNEKTHVA VSPLFQSIDG SSNIDEPSET LINQNNVREE 180
  181 ILSFSLPLAI DLTTIDSSYL TFDKDNLPNY EGADDPSEVF VVSAKNMGIQ LWADNQVNYG 240
  241 FFVNPEKDIE ERRSTIRYQI ADFLADERPL PFVSRSVRPW QSEATKQGVD KIYLVNLKRR 300
  301 QERLNRMQKI FDILGIEYSL LEATDGQKLD ELPEELKNYQ ILEGYLDPI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.30103
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #2
Region A:
Residues: [350-534]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKRPMKNGEI GCFLSHYRVW QDVVQHNYEK VIVFEDDLRF SHDGLTRIRE VLQDLDASHK  60
   61 PWDLIYLGRK KQSENEELWI SQHRHLSSVE YSYWTLGYML SLNGARKLLR PNPLKKMVPV 120
  121 DEYLPIMFNK HPNKDWSLHF EPLDVEAFTL YPLVVFPQKY TNEPGYVSDT EDSVIVTPKP 180
  181 KSEEL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.46
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle