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View Structure Prediction Details

Protein: CE33704
Organism: Caenorhabditis elegans
Length: 586 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33704.

Description E-value Query
Range
Subject
Range
gi|50754383 - gi|50754383|ref|XP_414360.1| PREDICTED: similar to Dolichyl-diphosphooligosaccharide--protein glycos...
825.0 [0..8] [586..268]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLFAIALL GAVFAEDAWK AANVDRTIDA TSQIVKVSTL YSFENVGNGP QSKVLIALSK  60
   61 EESATLSFIS AGIDGSKGKL KISEKPAEKD LAVYEVDLRT PVAKGAKVTI RINLRITQVL 120
  121 EPLPSKIQQS DSQFVVLHTS AYVPSLYETV TQKTTIRTTQ GGKLLSATTV SPSKQETERV 180
  181 IYGPYVNI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAFETKPVKV HYENNSPFVI ATIVERFIEV SHWGNIAVEE YIELVHKGAE LDGPFSRIDY  60
   61 QMDRRGRRQP ALQQFTTVLP AQAKDIYYRD EIGNISTSAV RIRADSVDVE IRPRFPLFGG 120
  121 WKTSYVIGYN LPSEEYLYSK GNQYALKTKL FDHVFNDIVV EKLRTKVLLP E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [360-483]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVKRVKVATP YAVDRRPEEL KPTYLDTTGR LVLVLEKENI VPDHSQFFTV TYEFEFVDML  60
   61 REPLLASAFF FSLFFVIIVY SRFDFTISSD PAKDAEERSQ IILGNLAKSV DSKQSAYEDL 120
  121 IEAS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [484-586]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQYKSTKNDA DLQEAKKTFI AARNQENSTL TDKIATLKTD SGASAAEKAS ELLKYDKTVF  60
   61 DAVDNYLKAV EKSTTKTAGT EEQQFLNKVK DARNRADSVL ASI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle