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View Structure Prediction Details

Protein: dop-1
Organism: Caenorhabditis elegans
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dop-1.

Description E-value Query
Range
Subject
Range
dop-1 - status:Partially_confirmed UniProt:Q86ME6 protein_id:AAO91736.1
158.0 [0..1] [212..249]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSRHYSRR STTTTTTATP RRGDKKTSSQ NKVESIRTSI FSKLNFLCPT RFKNQRSPQD  60
   61 PHTPAAHNRS NISDQKARLT LGVIMGTFLV CWLPFFTVNI LRAWLPEIFS SKTIMAVTWL 120
  121 GYANSSANPL IYSIFNRDFR RAFKKIIVRV FGCCWEEPDL NKSISSRYAA PDNIERRRSC 180
  181 TRSSESAHDN NNDANATRLN LLSNNNEETI PE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.30103
Match: 2j4yA
Description: No description for 2j4yA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle