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View Structure Prediction Details

Protein: CE33104
Organism: Caenorhabditis elegans
Length: 726 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33104.

Description E-value Query
Range
Subject
Range
CE33101 - status:Confirmed UniProt:P90882 protein_id:AAO12423.1
239.0 [0..1] [650..1]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFGSVSSV PPGSAKIPAF QMDYTITETD TLERVAASHD CTVGELMKLN KMASRMVFPG  60
   61 QKILVPLANA DDVFDPPSSA SSLKSSGNQI SGIENAEDGI R

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.94
Match: 2djpA
Description: No description for 2djpA was found.

Predicted Domain #2
Region A:
Residues: [102-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGPGGAVPAH VRRGSFTKTQ SAPIPRGSND EADTDCLQRF LKIKVKQVTE SDGTVSGTLL  60
   61 VTPNCLMFDP DVSHPLVKEN GPDLYGMVAN MDEIQSVSVY KEIS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 16.327902
Match: PF02893.11
Description: No description for PF02893.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [206-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLTGDKAEKK RDIFDPDHLR TPEDSPKKQI KQNGEIEIAK NEEVAFEAGS VDSNHSPKFG  60
   61 SDIALPAISE ETKDSPCEEA KGDLSRNRSA TLGDEEIQLR ARSRTSSQAS SNDERPRSFS 120
  121 ELDTPSEGKN IGRFSPNAAR RSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [349-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKLGRTLSAR AKSIQGTVTS GAEKVVGTAV QGTKTVAHGV VTHTKSAADT LQSGIENGAK  60
   61 AAADVAGRVV DKGQSLMSES INGVTEIFSV PDFEQPAKSP LAMKREQSLA KLQDLRRQTA 120
  121 EARENSAK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [477-650]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENHAGVFACA TSSDEAPDLF AAVDEIMERN RIQSNDSTAS QSPILPFYMA VRLTRNKKKK  60
   61 KSSTSSPSYD EDIAFGNKLK REFWFAVPRN QADNIYHFLL QWSPDKYGLD TTTSTTEEPS 120
  121 SVMSNDGQDK GFIVLGSNAD ESLGDGENCG GVSYREMLSS LVDKVQTSTN SLAS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [651-726]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVSQASSEEM SPYLRQIGSS VRRLSMPLGK VRQSSQRRLS QMVSAIGEVI DQEILLTQPG  60
   61 TGISEYRAKR LRCTKI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle