YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE33102
Organism: Caenorhabditis elegans
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33102.

Description E-value Query
Range
Subject
Range
gi|58047714 - gi|58047714|gb|AAH89183.1| Oxr1 protein [Mus musculus]
264.0 [0..5] [439..323]

Back

Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGANESALHG EDEATVPVRR RAHTSYTRSA PDYFGSPSSI KNFSNNMNNN NNNNDEKHKN  60
   61 SNVILTEFDV KQMMARSRAD TVCVSSLRRQ SSEEAEKSIL ETVRQTGSDG EEEASGMSKK 120
  121 GSITSRKSSG SHDSGVGTRP NSPIASNLHM PSSSNNDEVI EFKVPEITVS LAEDTSNSEE 180
  181 QKKKRNIKRA IMKKVFKKKS AKAIEMRTRS KSLGSNAIYS SEKSTPLFGS SLLNREWELV 240
  241 TVSEMCRRLS LDQELELPIP DGAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [265-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TSQILDELMI RQVMDILPPR AEGYPWVNIY NSEKHGFSLA TMYRKMAEFD EDLSPVLLII  60
   61 RDTKEHVFGA VVSSAIRPND HFFGTGDSCL LWRFTGEVPH TRELRQYNWT GDNQYFVNAA 120
  121 KDSLSIGAGS GRNGLWLDAD LNHGSSQKCE TFDNEPLCGD DQDFIIQFIE AYGFRM

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 73.920819
Match: PF07534.7
Description: No description for PF07534.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle