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View Structure Prediction Details

Protein: hum-2
Organism: Caenorhabditis elegans
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hum-2.

Description E-value Query
Range
Subject
Range
gi|115468142, gi... - gi|51535675|dbj|BAD37694.1| putative myosin heavy chain PCR43 [Oryza sativa Japonica Group], gi|1154...
272.0 [0..1] [239..1274]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAIEHVLS PKIVPGILQH ESSSDLMTAG QERRDRNSGS VESQRKSLDD LLQFMEIVHT  60
   61 KLTTYGGDDI VVKQVIGQMA RWMCALALNY MMFRRELCNF EKAIQIKHNV TQIQNWLNAK 120
  121 GLSDCRDHFE PLVQACHLLQ SRKDPSNLDT LCGEMTSRLK PRQVVAILQH YDPSDEMEDG 180
  181 LSPEFLVQIQ KKLNERAIAN NDPIEDKDKL IMLGTYLPPF DTQPFSYSDF PLETLSLPSC 240
  241 LHMQSVCRLV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.69897
Match: 2f6hX
Description: Myosin V cargo binding domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle