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View Structure Prediction Details

Protein: klp-13
Organism: Caenorhabditis elegans
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for klp-13.

Description E-value Query
Range
Subject
Range
gi|114554500 - gi|114554500|ref|XP_513170.2| PREDICTED: kinesin family member 17 [Pan troglodytes]
388.0 [0..2] [388..195]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMQKQQLTV VVRVRPLNSG EKSRKAFQCV FPLDKKVPRT SLSKKLNLFS FKRVLLVDPE  60
   61 KFENNILRQN RQHERKFEFD ASFGATSNQE DVHETTTGPI IDSVVEGFNA TVFAYGATGS 120
  121 GKTFTMIGTK DRPGLMTLMT KTLYEKLDNQ YQVLLSYMEI YNEIIRDLLN PSGGDLELLE 180
  181 DERGNIRVPE TTKFVNYRDS KLTRLLKDSL GGTAKTCMIA HVTPSSSNFE ETYNTLMYAS 240
  241 RAMNITNKPM RNRPASADQV YAEAMNAIRK EVGSQIKNSS SITGLAARSS VQERSSSRNR 300
  301 PKSISRNSSL TRAAQPMPID RGRGGSLFTQ LKEQYMTLSD KQKRLREKLM ATNQEAYSLE 360
  361 MSLISKNAII NAWEKHHHDK TAESIERLKK DGCGTI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.39794
Match: 1gojA
Description: Kinesin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle