YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE33035
Organism: Caenorhabditis elegans
Length: 764 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33035.

Description E-value Query
Range
Subject
Range
gi|2149616, gi|1... - gi|2149616|gb|AAC53348.1| AMP deaminase isoform C [Rattus norvegicus], gi|13928736|ref|NP_113732.1| ...
753.0 [0..3] [763..36]

Back

Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLPPDITE AQIETVDSEL FDSGPFKKNF AFGNADHSTA SPFEISTTPI EVNESRAHKT  60
   61 IEISNREK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [69-764]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAKSRRWSCL ARLESQNDGC LSPSSLKSVL DEIQTEPRCK SPQHIDLHTF RDAVDVNYQR  60
   61 MAITGEELSG VPLEDLKTAS GHLIEALHLR SKYMERIGNQ FPSTTRNFLS GHYPANLPKH 120
  121 RVKNTETTVQ TSFNPPDPPK DHWGKNDPLP KYEKIYHLRR NRGVTEICND DGSIDQQFKN 180
  181 VNVTKEEFLN DTEKLTAMIV DGPLKSFCFR RLSYLENKFQ LHVLLNELRE LHEQKGVSHR 240
  241 DFYNIRKVDT HIHAASSMNQ KHLLRFIKKK IKTEADTVVL NNNGTKVTMK EVFKKMGIDA 300
  301 YDLSVDMLDV HADRNTFHRF DKFNTKYNPV GESTLREIFI KTDNYVGGKY FADLLKEVLS 360
  361 DLEDSKYQHA EPRLSIYGRS KNEWDNLAKW ALTHDVWSPN ARWLVQIPRL YDVYRAKNMV 420
  421 KNFDDMLDNL FTPLFEVTND PSSHPELHLF LQQISGIDSV DDESKHEFVN FDRSTPCPPE 480
  481 YTDLENPPYN YYLFYMYRNI CALNAFRRAR GLNTFALRPH CGEAGHVSHL LTGYLTSESI 540
  541 AHGILLRKVP VLQYLYYLTQ IGIAMSPLSN NSLFISYQRN PLPEYLQKGL NVSLSTDDPL 600
  601 QFHYTKEALM EEFSIAAQVW KLSSCDMCEL ARNSVMQSGF EDKVKIHWLG PNYKEEGVLG 660
  661 NDIHRTNVPD IRVSFRHEAL VDELYNLFRV QNTLKQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 163.0
Match: 2a3lA
Description: X-Ray Structure of Adenosine 5'-Monophosphate Deaminase from Arabidopsis Thaliana in Complex with Coformycin 5'-Phosphate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 2.00269452684807 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.12925526582667 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 0.248802326836448 bayes_pls_golite062009
dihydroorotase activity 0.203044795244555 bayes_pls_golite062009
deaminase activity 0.18698811376434 bayes_pls_golite062009
binding 0.108087757923729 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.0954028693917728 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle