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View Structure Prediction Details

Protein: CE32870
Organism: Caenorhabditis elegans
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32870.

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
323.0 [0..2] [348..1368]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRASTACLVA LLAPFYISAL PVEYFYGDEQ QPIEEGAENS AVFEQDRELI GLFNPSKEIG  60
   61 QVSGLAVNKN GHIVAFHRSG RVWDEKSFND HETFNKDLGV INNKTIAIIS REKKVIDEFG 120
  121 AGLFYMPHGL TIDNNGDYWV TDVGSHQVHK IDAKTQKIVM SLGEKMVPGE DQAHFCKPTD 180
  181 VAVAKNGHIF VADGYCNSRI LKFDAKGNLM AQINAATEEN QPSEFVVPHS LSLIEDMNIV 240
  241 CVADRENQRV QCFSAGLSEG DRTLPTGIPI TSATDIGRVF AIREREHYLI GVTGNSEDVE 300
  301 AQMFSIDMQT GKTETFAKGV RNTHALAIAA DGVMFVSQLE PSRILEIRLL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle