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View Structure Prediction Details

Protein: CE32858
Organism: Caenorhabditis elegans
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32858.

Description E-value Query
Range
Subject
Range
gi|115745781, gi... - gi|115916244|ref|XP_788312.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus], gi|11...
368.0 [0..22] [502..11]

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Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNVLLDVVT TTLASAINLE DFRHCFLWAL IVGICLAFLL GFGMGANDVA NAFGTSVGSK  60
   61 ALTLFQAYCL ATIFETLGAV LVGYNVIDTM RRGVVDVAVY NNSAGDFMVG QVAVLGGTAT 120
  121 WLLIATCLQL PVSTTHAVVG ATLGFSIACK GFQGIQWMKV VNIVASWFIS PIFAGTVSLI 180
  181 LYLFVDHVIL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTSNPVANGL MWLPIFYFAC LTFNMFMISY QGSKVLHLSN VPLWAAIVVS LGAGIIAAAV  60
   61 CYFLVNPRIR KYIAKGKEAR ESPTSSVVIS VTGDPELDKV AIRSESTTTN ASNSCDSLQT 120
  121 PSPSEPQGKI RKFFKWLFPD KSRV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [335-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESEDTLRMFT SVQVLTACFA GFAHGANDVC NAIAPLVALI AVYRDFDVYQ KKETPITVLL  60
   61 YGVFAICVGL WCLGHKVIRT VGTNMSEVNP ASGFCIEFGA AVTALLASKM GLPISTTHCL 120
  121 VGAVVAVGSV KGGKETDWSL FRNVAFSWVV TLPVAGLFAA LYMWLLHFTI PARYA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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