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View Structure Prediction Details

Protein: CE32602
Organism: Caenorhabditis elegans
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32602.

Description E-value Query
Range
Subject
Range
gi|157775835 - gi|157775835|ref|XP_001665983.1| hypothetical protein CBG18398 [Caenorhabditis briggsae AF16]
gi|39591901, gi|... - gi|39591901|emb|CAE71479.1| Hypothetical protein CBG18398 [Caenorhabditis briggsae], gi|187025395|em...
352.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANWPRVSPL AYVALGVLLG LTISIISQTG TTTYDAASRI AILRANRGDP QVDEHDHAHG  60
   61 NDPHGDEEVD DHHANFAPVQ FHSNNSS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSHDGESLIA DEVAKKVRVF CWILTGKQNH DKRAKHVKAT WAKRCNKYVF MSSEEDAELP  60
   61 AINLNVSEGR DYLWAKTKGA FKYIYDHHLN DYDWFLKADD DTYVVMENLR FMLLAHSPDE 120
  121 PIHFGCKFKP FTQGGYHSGG AGYVLSREAL KKFIEVALPD KSLCSQNHGG AEDAEMGKCL 180
  181 EKVGVKAGDS RDADGHHRFM PFVPEHHLSP GHVDPKFWFW QYTYYPMDQG PTCCSDYAVS 240
  241 FHYVNPNLMY VLEYLIYHLK PFGIDRAIRV PKNETIIHTA YSISRSERGQ DDAFRDRPEV 300
  301 AV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.30103
Match: 2j0aA
Description: No description for 2j0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle