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View Structure Prediction Details

Protein: del-4
Organism: Caenorhabditis elegans
Length: 527 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for del-4.

Description E-value Query
Range
Subject
Range
gi|114644825 - gi|114644825|ref|XP_001155207.1| PREDICTED: amiloride-sensitive cation channel 2, neuronal isoform 1...
gi|156103611, gi... - gi|21536349|ref|NP_001086.2| amiloride-sensitive cation channel 2, neuronal isoform b [Homo sapiens]...
418.0 [0..11] [526..17]

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Predicted Domain #1
Region A:
Residues: [1-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVFWTGLKY VFTDFSCWTS THGVPHIGMA NARWLRAFWI LVVVVSIALF IWQFITLLTN  60
   61 YLSFSVNTET TLQFAERTFP TVTICHLNPW KLSETKSVDP DMSALIDAYN SDSSSAQFGL 120
  121 PASLTADRQQ QASKWTLMYS ERLNEKQYND AADIAYSYDD MVVSCTYNAK TCNITDFNDF 180
  181 YNPSYGNCLQ FNTDGMYSSS RAGPLYGLRM VMRTDQDTYL PWTEASGVII DIHMQDEIPY 240
  241 PDVFGYFAPP GTASSLGVSY VQTTRLSKPY GSCTTKTKLK TTHYTGTYTV EACFRSCMQE 300
  301 KIIASCGCYY PAYSHASNTT QYVSCDNGVQ TLSNLNCVDL INSADSTEFD VLTDCDCPQP 360
  361 CEIDSYGVTV STAQWPSDSY VPTECNPGGP SGPWDASGES CLDWYKANTI LIEIYYERMN 420
  421 FQVLTESPAY TFVNFISDVG GQVGLFLGMS IISAIEYLVL IFLVFFYCCT HKSRRAEIEQ 480
  481 LEMDIKKAKD DVDQVAEKRK KHQKANAELY EMDTAHDIVP PKPHSND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 99.0
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle