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View Structure Prediction Details

Protein: CE32476
Organism: Caenorhabditis elegans
Length: 370 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32476.

Description E-value Query
Range
Subject
Range
gi|42410098, gi|... - gi|42520360|ref|NP_966275.1| fumarate hydratase [Wolbachia endosymbiont of Drosophila melanogaster],...
373.0 [0..3] [366..11]

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Predicted Domain #1
Region A:
Residues: [1-370]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASEDKFESV LSTRYCKNSP LVSILSETNK ATLWRQLWIW LAEAEKELGL KQVTQDAIDE  60
   61 MKSNRDVFDW PFIRSEERKL KHDVMAHNHA FGKLCPTAAG IIHLGATSCF VQDNADLIAY 120
  121 RDSIDHILKR FATVIDRLAA FSLKNKEVVT VGRTHYQTAS LVTVGKRGVL WAQELLMAFQ 180
  181 SLSEFRDKMR FRGIKGATGT QDSFLTLFAG DESKVEALDE LVTKKANFSN RFLITGQTYS 240
  241 RQQDSQLVFS LSLLGAAAKK VCTDIRVLQA FGELLEPFEK DQIGSSAMPY KKNPMKSERC 300
  301 CALSRKLINA PQEALTILAD QGLERTLDDS AGRRMLIPDV LLTAEALLTT LQVSVLKITS 360
  361 SKDLVYKQTM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.522879
Match: 1yisA
Description: Structural genomics of Caenorhabditis elegans: adenylosuccinate lyase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle