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View Structure Prediction Details

Protein: CE32466
Organism: Caenorhabditis elegans
Length: 457 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32466.

Description E-value Query
Range
Subject
Range
CE32465 - arginyl-tRNA protein transferase like status:Confirmed UniProt:P90914 protein_id:CAB03170.2
507.0 [0..1] [457..1]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTFLEFIG ANQRSSCGYC KNDRGERTPA RSAKSGAWAH SMTVNDYSGL LDVGWRRSGR  60
   61 YLYKPDNRVT CCPQYTIRLD VTKFKMSRSQ KRAMRQMNEF LATGKRPVCG IKEEDAPVEM 120
  121 NLKGSGSQSE Q

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.552842
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKKNLKSHEV STKKMKDADR PVLTKKEIRN KKFEEKCRQK NLDPDVVRTE RRQKDAARQR  60
   61 TIQSYIDEAR PDWKHKLEVK LVSLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [217-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDEFGTRDNE SFELYKNYQH TIHKDEDCRL AGFRRFLCDS PLKKEQRGGI ELGSFHLWFL  60
   61 LDDKLIAVCV VDILPKCFSA KYMYYNPEYS FLSLGTYTAL REIEQTQRLH AIYSNLKYYY 120
  121 MGYYIHSCPK MRYKAKFRPS DLLCDQSFRW VD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 92.508638
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [369-457]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNSCRDLLDG STCSNGFSEF CPGAPRPASP VVDTLLVFSN GSITTLSDAL TEIPEAAENE  60
   61 QFLANVRDLA HLVGPDLSRV VYYFNELNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle