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View Structure Prediction Details

Protein: CE32465
Organism: Caenorhabditis elegans
Length: 485 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32465.

Description E-value Query
Range
Subject
Range
CE32466 - arginyl-tRNA protein transferase like status:Confirmed UniProt:Q8I4H6 protein_id:CAD56590.1
535.0 [0..1] [485..1]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTFLEFIG ANQRSSCGYC KNDRGERTPA RSAKKNAETG EEDLTNGLEE ELEVSSESSV  60
   61 TTGGAWAHSM TVNDYSGLLD VGWRRSGRYL YKPDNRVTCC PQYTIRLDVT KFKMSRSQKR 120
  121 AMRQMNEFLA TGKRPVCGIK EEDAPVEMNL KGSGSQSEQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 25.008774
Match: PF04376.4
Description: No description for PF04376.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKKNLKSHEV STKKMKDADR PVLTKKEIRN KKFEEKCRQK NLDPDVVRTE RRQKDAARQR  60
   61 TIQSYIDEAR PDWKHKLEVK LV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLGGDEFGTR DNESFELYKN YQHTIHKDED CRLAGFRRFL CDSPLKKEQR GGIELGSFHL  60
   61 WFLLDDKLIA VCVVDILPKC FSAKYMYYNP EYSFLSLGTY TALREIEQTQ RLHAIYSNLK 120
  121 YYYMGYYIHS CPKMRYKAKF RPSDLLCDQS FRWVD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 92.508638
Match: PF04377.6
Description: No description for PF04377.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [397-485]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNSCRDLLDG STCSNGFSEF CPGAPRPASP VVDTLLVFSN GSITTLSDAL TEIPEAAENE  60
   61 QFLANVRDLA HLVGPDLSRV VYYFNELNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle