YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE32385
Organism: Caenorhabditis elegans
Length: 373 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32385.

Description E-value Query
Range
Subject
Range
gi|109105896 - gi|109105896|ref|XP_001118440.1| PREDICTED: eukaryotic translation elongation factor 1 gamma [Macaca...
472.0 [0..2] [373..235]

Back

Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLQLTSSHL ELYVLIYLDT PAFEGDALLF GAESIGLHLT GTSANAETVQ WLQFAEGYLL  60
   61 PAVLGYVLPS VSAANFDKKT VEQYKNELNG QLQVLDRVLV KKTYLVGERL SLADVSVALD 120
  121 LLPAFQYVLD ANARKSIVNV TRWFRTVVNQ PAVKEVLGEV SLASSVAQFN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 1aw9A
Description: STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [171-373]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAKFTELSAK VAKSAPKAEK PKKEAKPAAA AAQPEDDEPK EEKSKDPFQD MPKGTFVLDN  60
   61 FKRSYSNEDT ATKAIPHFWE NFDADNWSIW KCEYKYPEDL TLAFMSCNLI NGMYQRLEKL 120
  121 KKNAFASMIL FGTDNNSTIS GIWVWKGDKL AFELSPDWQV DYESYTWTKL DAKSDATKKE 180
  181 VNEYLMWEGD FGGKKFNQGK IFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.09691
Match: 1pbuA
Description: Elongation factor 1-gamma C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle