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View Structure Prediction Details

Protein: vhp-1
Organism: Caenorhabditis elegans
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vhp-1.

Description E-value Query
Range
Subject
Range
vhp-1 - protein tyrosine phosphatase status:Confirmed UniProt:Q10038 protein_id:AAK68299.1
256.0 [0..1] [437..156]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLPQSLSQ PCLSQPTGDG ITLITPNIYL GSQIDSLDET MLDALDISVV INLSMTCPKS  60
   61 VCIKEDKNFM RIPVNDSYQE KLSPYFPMAY EFLEKCRRAG KKCLIHCLAG ISRSPTLAIS 120
  121 YIMRYMKMGS DDAYRYVKER RPSISPNFNF MGQLLEYENV LIKDHVLDYN QA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 2hxpA
Description: No description for 2hxpA was found.

Predicted Domain #2
Region A:
Residues: [173-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRPHRHMDYY GPSDLCPPKV PKSASSNCVF PGSTHDESSP SSPSVSEGSA ASEPETSSSA  60
   61 ASSSSTASAP PSMPSTSEQG TSSGTVNVN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [262-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKRNMTMDLG LPHRPKALGL PSRIGTSVAE LPSPSTELSR LSFNGPEAIA PSTPILNFTN  60
   61 PCFNSPIIPV ASSSREVILT LPTPAASSSS STSSEPSFDF SSFESSSSSS IVVENPFFAS 120
  121 TEVPAGSSSI STPSGSQSTP ASASSSAASR CRMKGFFKVF SKKAPASTST PVSIMKLH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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