Protein: | sop-2 |
Organism: | Caenorhabditis elegans |
Length: | 735 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sop-2.
Description | E-value | Query Range |
Subject Range |
|
364.0 | [0..2] | [733..807] |
Region A: Residues: [1-254] |
1 11 21 31 41 51 | | | | | | 1 MSSNLTSNEM SSTSAIVEPP EAVKGNERDK STRRSTSQVV RPEKHEVENA LEDQCSSSSL 60 61 PKEAQYYAKL DKKLEGKDPR SQFYEAVRLS ADIFAHKFEK AVCSRQTFEP TNSIIKVLNT 120 121 AEEEMLHEKV VPLPVSSKLQ YYLNRGRYDT IFDRDEQLQR TADPMADEPD HVEKRVTSIL 180 181 EQASREMEEG EVEPVFYDGS DEDQELPIDL GAMRNLQRTN KFAARSSRMA ARRGGRPGYR 240 241 GAFRGAARGA PSRR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [255-462] |
1 11 21 31 41 51 | | | | | | 1 PAPAAEVAPE TPVAAPMAPA APAAPATPEA APAAEVMDTS IATEMPQESA VDLSNVSAAT 60 61 EMDTSKEGEA SRPTSEKKKK IRTTEMDRLM SMDLGPKDGG RVGELGHMWP ESRRRPAAPL 120 121 PETPAAQPRK SLPRRAAEKK KPEDSDAAEE QEVEMEVDND ASTSTPRNAR GGRGGGNRRG 180 181 SRRGQKRTSG GSGKLVEPKK EPVDEPAE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [463-642] |
1 11 21 31 41 51 | | | | | | 1 KIPKRSEAAP EVPATATTKE APPSTSSSPP DAPATPATPA SSDSRDSPRK IRAMIFSLTG 60 61 SPPESETPPV LQQEQVISTA APTAGRHPNI IQQVPHINRI PPQPLRRLTA PQAPPASQPE 120 121 EPPVQQTVPV VKVELASAPA PIVRDPQSTE PVPPAMPTLV ENNHEATLIL PPNKTSDYTR 180 181 |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [643-735] |
1 11 21 31 41 51 | | | | | | 1 WNAQDLINWV RLLITNNVDS TIAIMVREEF DGETLACLVL DDDFRKEVPI PYGHYKKMKI 60 61 YGTEVLNHYR TEKYQADLRK FHEELAAWKA QQR |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.887 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |