| Protein: | CE32279 |
| Organism: | Caenorhabditis elegans |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32279.
| Description | E-value | Query Range |
Subject Range |
|
|
412.0 | [0..16] | [780..82] |
|
Region A: Residues: [1-720] |
1 11 21 31 41 51
| | | | | |
1 MVFRSSIIPL IRLLLLPYII SGLTTCPRQC ICHEHSIACS CETSEKPELI ISSLGSTYIT 60
61 SLVVHTCDKV TVQNGSFAGV VLVERLSFIA IGRLYFEPHA FKDILQSPRQ LVIDECTISS 120
121 LAPVSFAGLS HIDHLWFRNS RIDVIATEAF HYLTNIDYIY FHKTKIGRIE RKAFSKMYQI 180
181 DHLYFKDSIE IATIESEAFS GSQVDEMIFD GVTVETAHDT FLLNVESDMA ILKNCSIYLI 240
241 PRKEDDMVVF DEKQKIIERC LIESSSFNIM SPYKLGCNVL EVTSSVIQRI GPVSRDIDTP 300
301 VFRPEPFIIS SLNSVIFSNC SIGSVDSFAF TNYTLSILSF NHSRIGEMKT RTIEKSKISN 360
361 FEFGGSTVKL CNSSSIDKSK IQNFEVSGAE IDRINSDWIQ NSMIRKLKIR SSKIGKSEKN 420
421 IFKDSVFEEV EIDGNRILMM DSETLHGDNQ ISTLRITGND ITTSRPSPSF LSSSPQSHPS 480
481 NFILANNTFD CLPNDCSTNS FLLNSPKHSP LLYKISSNRC RPPLENPCVE PRSISLEDHG 540
541 ITCRISSLVA DCACLTEKSS IPSKFPLNYN ISVVILGDCE HLTIDQKLAD FTQIYIFRTT 600
601 KLIVQRLPKS LKVLKIFHST VTLEPSSFLN FPQDWEVSNS KVEHLGLSNL NISSLHLKFS 660
661 RISHISAAKN SKIKNLHIEN CHLESTQHLF EISQTLQMHN SIIFSSPRGL GTISSAQLQN 720
721
|
| Detection Method: |  |
| Confidence: | 45.0 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [721-782] |
1 11 21 31 41 51
| | | | | |
1 NTLLECCNLI ELDSRCDLHF FGSRCVEEDD VSTNHLPITS GSNITSFDVY IAIYLFVSRI 60
61 LL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
