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View Structure Prediction Details

Protein: CE32191
Organism: Caenorhabditis elegans
Length: 491 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32191.

Description E-value Query
Range
Subject
Range
gi|116132590, gi... - gi|118778872|ref|XP_308929.3| ENSANGP00000013171 [Anopheles gambiae str. PEST], gi|116132590|gb|EAA0...
416.0 [0..116] [489..408]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLDTIEKGA DGLDSIKSLA FVYGETDNPY TKTSELFTWL FGHEIADTVL LLLNDHIYIL  60
   61 GSNRKVEFFG SVTGDNQSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKVPTVSTLL RDKTDKDAGN FEKLIDHIKS AGGDVGNFVK EKFSSEFVSS WNKALEEGGV  60
   61 NKNDVTLAFT HLFAVKDDKE MDLIRKSAQA TTASWTAARA RYVEISDNEK VLIVLKIVEL 120
  121 GVLLRVRHSV LSNQFAAFMK DSKVQQALAK YE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADTCYDPIKM LIFVDRKYDS VVVPIFGIPV PFHISMIKNC SQSVEGDLTY LRINFATPGS  60
   61 QVGKDSGQFP HPLAHYMKEF TFRASNIKDH HSDSTAPSRN LSTAFRFIKE MQKRFKSEEA 120
  121 EQREKEGAVK QDKLILSQNK LNPKLNLLIC PNIIQKLITG SLEAHTNGFR FLFN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 73.657577
Match: PF08644.2
Description: No description for PF08644.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [406-491]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFSRYTSLRA FFEEGGWSFL NAESDNEEAM DDSDDSDAYD PEEEDASAGS GSESDEDESE  60
   61 GEETESDDDD EGSLDSDEFV QPIFAF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle