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View Structure Prediction Details

Protein: cat-2
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cat-2.

Description E-value Query
Range
Subject
Range
gi|73988890 - gi|73988890|ref|XP_854768.1| PREDICTED: similar to tryptophan hydroxylase 1 [Canis familiaris]
445.0 [0..79] [393..35]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLRYMRRRG SGEDHEEEPR GVTVIATKVA ENSKNPRRYS LVHQASCETQ HHKGIRRQNT  60
   61 IQHRKQLTDQ MRCQKILQQL ND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.045757
Match: 2qmxA
Description: No description for 2qmxA was found.

Predicted Domain #2
Region A:
Residues: [83-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGIEVIFTAN DVTPIEFSII LTSTDPTLSN FVSDILQNMS SAKVQICHVE TRGNEASHDV  60
   61 LLACKATKNQ LIHSAELLTQ NHVALTKFSI FAKKLSDEKN QSQIWFPRHI SELDQCSKCI 120
  121 TKYEPTTDPR HPGHGDVAYI ARRKFLNDQA LEFKFGDEIG YVDYTEEEHA TWKAVYEKLG 180
  181 DLHLSHTCAV YRQNLKILQE EKVLTADRIP QIRDVNKFLQ KKTGFELRPC SGLLSARDFL 240
  241 ASLAFRVFQT TTYLRHHKSP HHSPEPDLIH ELLGHVPMFS DPLLAQMSQD IGLMSLGASD 300
  301 EHIEKLSTVY W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 112.0
Match: 1phzA
Description: Phenylalanine hydroxylase N-terminal domain; Phenylalanine hydroxylase, PAH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.402888380251327 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle