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View Structure Prediction Details

Protein: CE32095
Organism: Caenorhabditis elegans
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32095.

Description E-value Query
Range
Subject
Range
gi|115939117, gi... - gi|115939117|ref|XP_001195313.1| PREDICTED: similar to Down syndrome cell adhesion molecule, partial...
216.0 [0..2] [295..191]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWVVGACFLG LLAYILPDWR YLMFCISVPN IFVALLIYMT VPESLHFLVS SQQNEKIEAW  60
   61 LEKIRGPKGD ISASDIVEDR DENGSSFKTL CREMWKHKMF IVYVLVMTYI WIVDTFIYFG 120
  121 LAFYSTNLAG NLYLNFVLMS LVEAPAYIFS PIFMNKYGRK VLISGTHIIA GLSFLGIVLS 180
  181 SEAWHIHFWL LGKFAISCSF MSIYMFASEI FPTDGRNKCI GFCETLSRFG GMLSPYLSHL 240
  241 TAVHALAPAI TLSLIAVSGG LLTLILPETL NTKLPSTIAE TASRRQLIDD KSDSSSN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle