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View Structure Prediction Details

Protein: CE32083
Organism: Caenorhabditis elegans
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32083.

Description E-value Query
Range
Subject
Range
gi|50761706 - gi|50761706|ref|XP_424808.1| PREDICTED: similar to RNA 3-terminal phosphate cyclase-like protein [Ga...
474.0 [0..3] [378..6]

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Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETLEFSG CNFFRIRLAY SILSGRPIRI INIRKNDDRP GIRDFESKLI GLLEKVTNGT  60
   61 KVEISRTGTQ VIFRPGMITG GVVNLDCGTE RCISYFLEPL LLLSPFCKVP MVIKLKGVTN 120
  121 APGEISVDGM KASWLKVYNK FVLNDEKLDI KIQARGLKPE GGGVVVFTAP IVKTLRPVKR 180
  181 QQVGKVCKIR GQAYVTKVTP SLAYRMIDAA KKAMHGYISD VYITVDQRKG DAGGASPGYG 240
  241 LFLTAETTEG VIYQAEAISR PKGESGVPIL PEDIGIEAGH ALLQQIYMGG ALDSSAQILA 300
  301 STFMTLCPKD VSHFLYGPLP MYSVHALRHL KQFFEIEFKM EDFKKTLKEE EADLKTGSAD 360
  361 KAMVTAVGVG YSNLNKTIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 1qmhA
Description: RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.54689525592227 bayes_pls_golite062009
transferase activity 1.7007536630883 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.24131488513793 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle