YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE31393
Organism: Caenorhabditis elegans
Length: 621 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31393.

Description E-value Query
Range
Subject
Range
CE39077 - status:Partially_confirmed UniProt:Q3V5J0 protein_id:ABA00174.1
335.0 [0..1] [621..1]

Back

Predicted Domain #1
Region A:
Residues: [1-621]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDLQLFTPL IRYSEPEEGE PQTIHPNKEQ LSRRHAIIPD QPSENQETSS QGCCSSDNVI  60
   61 IVPHVQISPN ESHLFNRAIS SGGGLLADSN KITSIDLQRA TIASQAFYAE ASEPQKNRSP 120
  121 WILKRLYEWS GRAKRREIIK HVQAALETSK DHEIEDDELE KLLPVSFEEM FMGDETTTIP 180
  181 SSKHKYLQAV WELFHTELVF LYRQLFVLRD VYKEPLKRCQ VEGCLLLVEP DLLFGNLDQL 240
  241 CRISRTFCQS FLSLLSTVDK ENWDCTQLVV DLFERFSKGP STISAYQAYC INYKATMEYL 300
  301 GSIRQKEERF TEFERICLAD ERCFRLQLED LLIAPLQRIT RLPILLREIH KRSEEEESKG 360
  361 KVEKVIDTMT ESLRSIDDSV QWLHNFERLQ QLQTQVVWPN ISDLEPKSYV PDFLRVALSR 420
  421 QFCENLLAHP RRKLIHEGPL ELVENGRTVD MYAFLFNDMF VLTKTKKCAS KLKVKGVPIG 480
  481 KSEHYIVQRQ PVPLDSCVFC DADSNDQATP MSLKFAFVII HLTRYYQVVG IYTLQAADKA 540
  541 DKELWIEKFQ ESIENYESIQ LKDMLKCTPL FSSLSLRRCS SSRLMSKSES NSPQLPKEKE 600
  601 KEKEEKKECC SSSTCNNQAP P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 2pz1A
Description: No description for 2pz1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle