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View Structure Prediction Details

Protein: sut-2
Organism: Caenorhabditis elegans
Length: 740 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sut-2.

Description E-value Query
Range
Subject
Range
gi|73963831 - gi|73963831|ref|XP_868396.1| PREDICTED: similar to nuclear protein UKp68 isoform 1 isoform 9 [Canis ...
396.0 [0..10] [727..5]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTQTGTGTS EVSKKLKAAI RAKLEELGVY VDDELPDYIM VMIANKKEKV QMKDDLNLFI  60
   61 GKSTAKFVDW LFDLFDRLQN ASNKQGETSK KEEDKRKELE ATAAAKEHEE KRRKEKEEHE 120
  121 KELQKEKERE KERQRERDRE KRAEEEKRRE EKRKEIQRSK RRRTRSRSNT YSDEEEHVRA 180
  181 RGEKHDRHHH KDHRRGRSHE RKIITSTIVR QASASPDKKL HSTVTVKRNI RPTGDQNIKG 240
  241 RGTMFLRAMN EASVSAGYGS SSKRSETHHE DDMSDVEALP SKPASTKSPK KSIRDRMSRI 300
  301 SKTSEPPIEE DDAVVLEDFA QTGGGPQMIL KLSGGREAIK KTRIQDRIVV DDGLRRGLLK 360
  361 RKIETASGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.154902
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [370-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAGAATSEEP KSKHDRIIFD ITPSRDSTPT DDSPTMQKWN GQIEIGDDSE ESEDDEEAEI  60
   61 DAFVAEARGI ARRESFRDEE DELPPTHQLS GGPYAYHHST AAPTYIPTPL SVLSEQQNQM 120
  121 GGGAAKEDHH VKERCIFWPK CTKGDT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [516-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CAFMHPTTNC KNFPNCTFGI RCLFIHPPCR FDRFCTKKHC PFTHHGTGGQ QPGGAQLTSE  60
   61 FKNPLTSSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.045757
Match: 2d9nA
Description: No description for 2d9nA was found.

Predicted Domain #4
Region A:
Residues: [585-740]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTVPSPFIA ATAAAVEELP KPAARGALGS LAEKLAASIK KKPAPGAESE KKEEKSDENE  60
   61 SKAEEPKAEV APVQPKPLPD IAPLHSMVLC RYAGACRNPI CHFKHPKECR FGANCRNPSC 120
  121 YFYHKPAGAA PTPVAAPIAA ESAGAAKYKW TSATAN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.95
Match: 2e5sA
Description: No description for 2e5sA was found.

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Created and Maintained by: Michael Riffle