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View Structure Prediction Details

Protein: CE31382
Organism: Caenorhabditis elegans
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31382.

Description E-value Query
Range
Subject
Range
gi|91798521, gi|... - gi|92115431|ref|YP_575359.1| putative inner membrane protein translocase component YidC [Chromohalob...
286.0 [0..4] [304..321]

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Predicted Domain #1
Region A:
Residues: [1-124]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRICAPRH ISIASTSFLN PQNRCETTIS RRNMSALPPA IAPAFQYASD CYIAQSIQFG  60
   61 MESLHGLGLS WPGAFISAAI LLRIGTAPLH IYAEKLFANR LHAQNFLTQG IMKKVSERYR 120
  121 VQLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [125-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSTDGTKLEV KSSDPKIAKA TQDALQEVPA MLAEHGLQAA RIQNLKMCTV PVWIFSSFAL  60
   61 RNVINSDFHP SVAGHLWIPD MLAPDPYFIL PVAVGVFGFL NLYSQRKIYP GVVKMTWKQK 120
  121 SYDGVLAFFT MFAVTIMAQL PACIPLYWLI VSTTGMAQAQ MLRHPKIKGI FGIKKLPTDS 180
  181 ATPIRDLFKM RNV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.638272
Match: PF02096.11
Description: No description for PF02096.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle