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View Structure Prediction Details

Protein: CE31741
Organism: Caenorhabditis elegans
Length: 469 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31741.

Description E-value Query
Range
Subject
Range
gi|70984531, gi|... - gi|70984531|ref|XP_747772.1| MFS multidrug transporter [Aspergillus fumigatus Af293], gi|66845399|gb...
gi|159122556 - gi|159122556|gb|EDP47677.1| MFS multidrug transporter, putative [Aspergillus fumigatus A1163]
197.0 [0..29] [447..166]

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Predicted Domain #1
Region A:
Residues: [1-469]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRYLRMLGM EIPLFLYMLG SYLNYPVFQN LIYEKECLIK YQQNETFCRN VSAYYDDKDI  60
   61 QAAANHFYFI SSLTLLCPSL VTTLLLGAAT DYWSIKIPLI IPYIGCILGT INYVFQSYFI 120
  121 HTSVYFLLIS DALFGLCGGF IAIISTTLTY GVKTSMLRYR SYRIAGVEGA IGLGGTVGFA 180
  181 LSGTIREACG YAVTFLIILG LQLLALLYLL GLAKETKFEP VRPDEHTSLI STTGKQLVAV 240
  241 IREFYRVITK SRQFRLLLIL NLLAFGLEML VFSGLSDIQY SYLRYKLQWG DKKYGWFSGL 300
  301 SYGITTAAVL FLYPLLRMKL MSDGMLATLG LFFKMISLFM FAFLQNEVMA YSIAVIVMFN 360
  361 RFVSTGFRAF ISSLIDMQEQ GKIFSVISLL EGITTLVATS IYNNVYPNTL TFFPGLLYLI 420
  421 SAVTLLIPLA IVSTSDFVVR THRPEVSEGI LNSRNDVIDE DGSIEDLSY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle