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View Structure Prediction Details

Protein: unc-62
Organism: Caenorhabditis elegans
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-62.

Description E-value Query
Range
Subject
Range
unc-62 - homeobox protein status:Confirmed UniProt:Q9N5D6 protein_id:AAF39974.1
97.0 [0..4] [153..415]

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Predicted Domain #1
Region A:
Residues: [1-56]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNFQHPYPS EEQKKQLAKE TGLTILQVNN WFINARRRIV QPMIDQNNRA GRSGQM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.522879
Match: 1b72B
Description: pbx1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [57-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NVCKNRRRNR SEQSPGPSPD SGSDSGANYS PDPSSLAAST AMPYPAEFYM QRTMPYGGFP  60
   61 SFTNPAMPFM NPMMGFQVAP TVDALSQQWV DLSAPHE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle