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View Structure Prediction Details

Protein: CE31711
Organism: Caenorhabditis elegans
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31711.

Description E-value Query
Range
Subject
Range
gi|39585998, gi|... - gi|39585998|emb|CAE68289.1| Hypothetical protein CBG13974 [Caenorhabditis briggsae], gi|187028219|em...
gi|157759047 - gi|157759047|ref|XP_001671867.1| Hypothetical protein CBG13974 [Caenorhabditis briggsae AF16]
179.0 [0..4] [201..3]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHEILEVPV NSEKRKVEIC HVTGRFFASK SDCPYLESAA HVCLNRNSAE DDKNWHYNSN  60
   61 LLPILDELVA ILVEFGFANV IRLETTPDRE IQRKTLEISE IPFENSKEFR TKRLVVRDFW 120
  121 KKGYFIADGT RFGGNYLVYT SSPNTCHAEF VLICAPITDE ERISAMRCCN QVKKTLLLAT 180
  181 TSSESTQPHY TQCTWFRPEF Y

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Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2cv8A
Description: Crystal structure of tRNA-intron endonuclease from Sulfolobus tokodaii
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle