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View Structure Prediction Details

Protein: dpf-6
Organism: Caenorhabditis elegans
Length: 511 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpf-6.

Description E-value Query
Range
Subject
Range
dpf-6 - acylamino-acid-releasing enzyme status:Partially_confirmed UniProt:P34422 protein_id:AAM48525.1
334.0 [0..6] [511..235]

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Predicted Domain #1
Region A:
Residues: [1-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNFRPITFD KSNNFMYWIM GDGSDLGNLV VFPFEDPQQK EILYTAQRAQ IGNVLIHPTD  60
   61 KTLLAVTEVY HKPELFVANE TFMEDLQYLV NMKPSGSMNI VSMSIDMSTW LVTYSSSDEP 120
  121 YDIYLYRRWN KKAELFMSTR PELKKYTLNK QIGFDFRARD EMTIQAYLSL PPQAPLLKSS 180
  181 QVPDGDRPYA NLGMIPAVPQ KMIVLVHGGP KARDHYGFSP MNAWLTNRGY SVLQVNFRGS 240
  241 TGFGKRLTNA GNGEWGRKMH FDILDAVEFA VSKGIANRSE VAVMGGSYGG YETLVALTFT 300
  301 PQTFACGVDI VGPSNLISLV QAIPPYWLGF RKDLIKMVGA DISDEEGRQS LQSRSPLFFA 360
  361 DRVTKPIMII QGANDPRVKQ AESDQFVAAL EKKHIPVTYL LYPDEGHGVR KPQNSMEQHG 420
  421 HIETFLQQCL GGETQP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 1vz2A
Description: PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, Y73C/V427C/C255T MUTANT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [437-511]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQPGQYNSSA IIKKIGIEGA AIARQNLQIA QNQFAQQLPR GPVAPSIFYR PPVRAQRVML  60
   61 APNQNVMNRI FPVQG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.0
Match: 1qe3A
Description: Thermophylic para-nitrobenzyl esterase (PNB esterase)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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