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View Structure Prediction Details

Protein: bath-29
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bath-29.

Description E-value Query
Range
Subject
Range
bath-30 - status:Confirmed UniProt:Q8MXH8 protein_id:AAM98035.1
210.0 [0..1] [314..1]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSQVTGKE FVLRCVFNDV SNMNDNDMRF GTVEEYFNVP WIFQIQRNNG NLGIYLRCTN  60
   61 LKDQEMWSIF SELELKLVSV YSDTRDQKCK IDMCFGHDSG KFYSSYGWSE FISWNELETS 120
  121 FMEAGSITVE ARVLINKSIG FYTPKLMDFD EKMMEYSDIV VLVNGQRFYL LKKFLAFHST 180
  181 FFESLFLGGF YEAKLAEVPL YDIDVDDFQK FLEVLYGFPV INDNTVEGIL LLADMYQTPL 240
  241 VSELCEDFLI QTTGKTYRKK LQMAIKFNLE NLKQFCISMI KSPFDLRSMI PSDISSIDHS 300
  301 TLAALFTKSL TLMK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.221849
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle