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View Structure Prediction Details

Protein: bath-30
Organism: Caenorhabditis elegans
Length: 314 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bath-30.

Description E-value Query
Range
Subject
Range
bath-29 - status:Partially_confirmed UniProt:O44805 protein_id:AAB94962.2
210.0 [0..1] [314..1]

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Predicted Domain #1
Region A:
Residues: [1-314]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSSVTGKE FVIRYVFNDV SNMNENDMRI STVEEYFNVP WIFQIQRNNG NLGIYLRCRK  60
   61 LKGQEMWSMF TELELKLISV YSDTRDQKCK TDMCFGHDSG KFYSSYGWSE FISWNELETS 120
  121 FMDAGSITVE ARVIINKSIG FYTPKLMNFD EKKKEYSDIV VLVDGQRFYL LKKFLAFHST 180
  181 FFESLFLGGF YEAKLTEVPL YDIDVDDFQK FLEVLYGFPV INDNTVEGIL LLADMYQTPL 240
  241 VSELCEDFLI QTTGKTYKKK LQMAIKFNLE NLKQFCISMI KSPFDLRSMI PSDISSIDHS 300
  301 TLAALFTKSL TLMK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle