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View Structure Prediction Details

Protein: tag-324
Organism: Caenorhabditis elegans
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-324.

Description E-value Query
Range
Subject
Range
ASIC1_OPSTA - Acid-sensing ion channel 1 OS=Opsanus tau GN=asic1 PE=1 SV=1
301.0 [0..30] [443..18]

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Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTETSNCSSS SSEYEEEEER IVLHVYDDES KEFTSLTTYH GMIRIYTSET WPSRIFWGVV  60
   61 VVTCVTLFMI QGGVLLEFYN SHPTATKIDE YRLPTSFLPS ISICPYGFKT DDNLFYLITQ 120
  121 GDKDVYIPPD YWKNSSKQLL KRLSYKCEDV VESIMINPNQ IIDFCANSRT QITEIGKCFT 180
  181 FENWREFETN TLKIKLKKMY TAHIHSEYYE VSRSSTQAWL KPGSHAKLSF RIEEQHNLPQ 240
  241 NNWGTCKVQT GEIYNHLGCL EQCLVAGYDQ SCHCSPFFNR FTRFHCSIDE LLNCPKLKEV 300
  301 PCDCPMQCYS QNYVLQPVSL LKSRSNISTV TFHLNSNLLR SHQQYKRFKQ IDLMSYIGGV 360
  361 MGLFLGMSCV TLLEVFIYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.39794
Match: 2qtsA
Description: No description for 2qtsA was found.

Predicted Domain #2
Region A:
Residues: [380-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FKTIFGTLNS TRHKAFIERL LSNEDGSIHG SHEEIIITQK IEKTVQKETL EQPLEQVADT  60
   61 RPLAERRFSL MPNNQLGVKV QFHRPNHLLK RNSVYLGNCD F

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle