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View Structure Prediction Details

Protein: nhr-31
Organism: Caenorhabditis elegans
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-31.

Description E-value Query
Range
Subject
Range
gi|10197985 - gi|10197985|gb|AAG15127.1| nuclear receptor NHR-31 [Caenorhabditis elegans]
163.0 [0..1] [164..13]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLDVEDWE YWGDEYLEEE PTYAIRPGTR VVKVERVPMM RGDLRTSGAT SSSGPATSYI  60
   61 IRPSDKQPTV SSGGSQNGDS VCAVCGDGIA KLHYGVLACY GCKGFFRRTL TGKYRYACRF 120
  121 SNNCIVDKYF NVVFKQEWIQ KQSGRIGIRQ ENRKFQELRR SKLMRSF

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Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 2a66A
Description: Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle