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View Structure Prediction Details

Protein: CE30864
Organism: Caenorhabditis elegans
Length: 545 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30864.

Description E-value Query
Range
Subject
Range
gi|66044853, gi|... - gi|66044853|ref|YP_234694.1| hypothetical protein Psyr_1608 [Pseudomonas syringae pv. syringae B728a...
263.0 [0..22] [529..190]

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Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHLPLLILC YICFVENSLV SRIKRQTSVD SNAETDGNGD SVLTDASTQH FKSPDGVLGM  60
   61 NVTANGNSSG TGSANIQTSA GGNVGESNVN NVANVMSVGD SVNSYSDIFA AVEGEKMTSN 120
  121 VLQQGRVAGQ GATLSNVNGG SSMQNSNGAL KNGFSYGNAG GTGSINTEAE VQTQQALSWD 180
  181 QLMARLMASA SASGLGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AQSNLDLGTG SDDQNITISG LVSGLNSNEG LVNTLVKGNG IINGTDQKMT GTMYGVASGK  60
   61 GNSTLVGASS IVSNQSSSAG EIQAFGNSNA FSDGNSSVNL MSNTNIESDS GLGVVHIDGA 120
  121 GQGTDNYVVA SNGLKFVNSE NDAAFVGSGN IRGSGSDTNS LASQSVETAV DPSGIVKIIS 180
  181 KSNGSSISHD NQNSSLTFNN NGLVGGWRNS SFSGFSNGVG GASGNENNVT GSGFVELDGD 240
  241 IMNGNSSMQA FGSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [452-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGPIAADTKA VLNLMENGVQ KNRTIHGMAA ADGDNTHVQS LSMIGNINGS ESMNNYQRVF  60
   61 SSGAGSSSVS SSSSTIFKRK KRFSVLSRIL KPMN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle