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View Structure Prediction Details

Protein: CE31415
Organism: Caenorhabditis elegans
Length: 793 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31415.

Description E-value Query
Range
Subject
Range
gi|187040370, gi... - gi|39579589|emb|CAE56500.1| Hypothetical protein CBG24218 [Caenorhabditis briggsae], gi|187040370|em...
970.0 [0..10] [782..13]

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Predicted Domain #1
Region A:
Residues: [1-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIDWLNAIP DSEDSEEDEE ERQERARLLK EKEEEREACK KRYLERIERE EAQRFGKQFK  60
   61 IDPLTFAERL ERKLIPAEKK QRYREFIPCV VDHFGGTDVH FVKAMESIKT ENQLLDFLTA 120
  121 AHKPLIEQTE DSVLHDWLAE FYKETVTSLL EMTSITDHDL KCFKVGNVFD EVRTNAIQKK 180
  181 VQKMEMENFA ERVREAKIKE AEERKATAEA TRDVLESLEG MTLSHVKHDE LEDELNTIAL 240
  241 EELHSTTRDT SPPRTRLSTR AQSQLNAMVK HLFVPA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [277-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APTTSTEVPM EMDKDDDEMD AYDDSDLKIL FSSTTKESLK MEMGEENDEC NFEPSQVSKY  60
   61 PSFQASSQFD ETRRYDYDEE GD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [359-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NKELARLRRP TWRKILNYEK RIGTNFHRFT NAENANLWRR NLYEDKRKKT SKVQFVDYDS  60
   61 PLNKMRLFVR PNEQFFNADD GPMTDRIDFS LSDGFNVLAT RKIMSPLVCG SNYDCEFMAR 120
  121 TREGPQYLVR KTQSWMHSYC GNILGRFWYL RDRHADKYPG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [519-793]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKDSNYDQKR RQNFGLLRYY TLEELIEVFG LLLPDVQIAM RRGVRRENMP VSTVVKLKEK  60
   61 DREAVESPVQ GVLLLTDWRL VHLFDNTAIV NAIIHYFPTN LGGVFFEAMT EYLTELLLDN 120
  121 TIEFHTIIFA FGGTPTFKKQ DFLAFWKKLI VRTTQSIDVF WMAQDWCDGL NSTQEEIDQL 180
  181 NEFNHYVEQM FTMMRKNGNI NYNYCDIRKQ YNIPSLDPSF NRPNDFLLLE PIYRAYINHF 240
  241 VDECNCYLKG PFVKCQPRVH NGYAQRNGTK LEFSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle