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View Structure Prediction Details

Protein: CE29654
Organism: Caenorhabditis elegans
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29654.

Description E-value Query
Range
Subject
Range
gi|114670980 - gi|114670980|ref|XP_001164327.1| PREDICTED: prolyl 4-hydroxylase, beta subunit isoform 5 [Pan troglo...
285.0 [0..21] [396..17]

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Predicted Domain #1
Region A:
Residues: [1-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKYFLLPLL SLSVLLFVYD TEATNPPTAV LDLSDKFLDV KDEGMWFVEF YAPWCAHCKR  60
   61 LHPVWDQVGH TLSDSNLPIR VGKLDCTRFP AVANKLSIQG YPTILFFRNG HVIDYRGGRE 120
  121 KEALVSFAKR CAAPIIEVIN ENQIEKVKLS ARSQPSYVFF GTSSGPLFDA FNEAASSKFS 180
  181 VARFYSVAPP ENDASFRQRV AVFKDNFEIE FNGDIEKLTE WVTRERWPGF LQATSSNLAE 240
  241 IGASGKLVVL VVSSESHKFN NTSPIREFHK TAEEASKELR KHPDLWNRFQ FAWLDGSDLA 300
  301 SQIQMAAVSE PHLFIFNYTS YEYYLSEDEP SQMTIKSILT FLEQTSEGID KETIVAFGGR 360
  361 HLLTRIKRMA FELYWNIAQM FATQPLLSSC LFGVPIAFLS IICYSICSAD FTVDRDEFYG 420
  421 DEDELIDDEE GEETEHPETD DDHEKAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle