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View Structure Prediction Details

Protein: CE30103
Organism: Caenorhabditis elegans
Length: 461 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30103.

Description E-value Query
Range
Subject
Range
gi|149254221, gi... - gi|31044455|ref|NP_851835.1| RasGEF domain family, member 1B isoform 2 [Mus musculus], gi|29747988|g...
373.0 [0..21] [459..25]

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Predicted Domain #1
Region A:
Residues: [1-461]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLTQQVSA VRLDTHKSDT FEQNDLVLDN TGAVLSGSRD ALIRRLVPTR DFCPDESYIF  60
   61 SLLVNIRTFI SPHELMQKIV QYCMFAQNAD SHNFAKEGRG RMFAHILRLC SEWATNIPYD 120
  121 FKTEYMRTRL NELLRLCAVD KTYQQKTTEL QSTLRSSLNK LDRYEKAVAN LQKALSENTN 180
  181 LPEQSDSMTG LFVLCNDAKT VAQQLTHIEM ERFSMVGVDE IVQSLASDPL SEIGRHSKNK 240
  241 EGTISSISFY IEWFNRLSAF AAIEVLKQTK KRNRVAVFEF MIDIAKECCE IGNFNSMMAI 300
  301 VAGLSLPAVS RLKKTWCRVE KAKLEILQHQ LDPSGNFLSY RATIKAAQWR ADSARGNQQK 360
  361 IVIPFFVLLL KDLFLIYHGH PRILPNAHLN FMAFNQLAEQ LRDVIQWKST VCTFEKNPQV 420
  421 LQYLLITSVS GEKDSMLMSF ECEPPESSSE RDQHKKLKGG K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.0
Match: 2ii0A
Description: No description for 2ii0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle