| Protein: | CE30088 |
| Organism: | Caenorhabditis elegans |
| Length: | 586 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30088.
| Description | E-value | Query Range |
Subject Range |
|
|
339.0 | [0..1] | [582..814] |
|
Region A: Residues: [1-510] |
1 11 21 31 41 51
| | | | | |
1 MRLKFALLFL ILVVYSFAYN PVKSNDKDKA LADNSKKVKV KKAELTAAQD EDDEGSKSLD 60
61 EVEEDAGIDD DEQDDDEDVK EVPKKKSHVK QKKSKKPPAK KDKTRKSKKN DQEITEELKD 120
121 EIEEEDDSNE YQACNADTSP DNELCHCDVH EIDCSEITME SGDPYLRTLD VAIMKKDFEP 180
181 ITAKFTKNKI SRLQNDKVLP KFEKFVSILD VSYNEIRFID NDVFKPFTNL TKLYLSHNVL 240
241 QTVKKDVFDA AKNTLHRLDL GYNRIKVVSD NSFDTLSKLK VLSLDGNPIK AWRKEMFKGL 300
301 DSLEELSLDN CNIENLPADI FEYLPKLVKL SLRENPLEEI PAVVAHLKSL KDIDLSVTNL 360
361 TEIRDHAFAG DSDLEEIILE KMPFLTVVRD CGFCGLPQLK TLILNDNKYL QELHPNAFGY 420
421 IKSQPGHKSA AITSLQIHNS NISTISEHMV DYDNLKTFQV GGNPWNCNCD TQFMLEEKFA 480
481 FKQDSVAPKC TSPAGLNGRL LVTVRASDAC
|
| Detection Method: |  |
| Confidence: | 39.154902 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [511-586] |
1 11 21 31 41 51
| | | | | |
1 EDARFLGRSG RFSSVLGLAL LVGFIAIGTY YMVSSGKLER LVRRVRKEPE VTYTNLQNAG 60
61 EDFALETDFQ PRPAEV
|
| Detection Method: | |
| Confidence: | 50.69897 |
| Match: | 2id5A |
| Description: | No description for 2id5A was found. |
