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View Structure Prediction Details

Protein: aco-2
Organism: Caenorhabditis elegans
Length: 665 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aco-2.

Description E-value Query
Range
Subject
Range
gi|84691344, gi|... - gi|84702098|ref|ZP_01016673.1| aconitate hydratase 1 [Parvularcula bermudensis HTCC2503], gi|8469134...
726.0 [0..5] [663..143]

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Predicted Domain #1
Region A:
Residues: [1-665]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLLRLSHL AGPAHYRALH SSSSIWSKVA ISKFEPKSYL PYEKLSQTVK IVKDRLKRPL  60
   61 TLSEKILYGH LDQPKTQDIE RGVSYLRLRP DRVAMQDAVD VMADIPWELK CPKVIGIKLT 120
  121 GKLNGWTSAK DVILKVADIL TVKGGTGAIV EYFGPGVDSI SATGMGTICN MGAEIGATTS 180
  181 VFPYNESMYK YLEATGRKEI AEEARKYKDL LTADDGANYD QIIEINLDTL TPHVNGPFTP 240
  241 DLASSIDKLG ENAKKNGWPL DVKVSLIGSC TNSSYEDMTR AASIAKQALD KGLKAKTIFT 300
  301 ITPGSEQVRA TIERDGLSKI FADFGGMVLA NACGPCIGQW DRQDVKKGEK NTIVTSYNRN 360
  361 FTGRNDANPA THGFVTSPDI TTAMAISGRL DFNPLTDELT AADGSKFKLQ APTGLDLPPK 420
  421 GYDPGEDTFQ APSGSGQVDV SPSSDRLQLL SPFDKWDGKD LEDMKILIKV TGKCTTDHIS 480
  481 AAGPWLKYRG HLDNISNNLF LTAINADNGE MNKVKNQVTG EYGAVPATAR KYKADGVRWV 540
  541 AIGDENYGEG SSREHAALEP RHLGGRAIIV KSFARIHETN LKKQGMLPLT FANPADYDKI 600
  601 DPSDNVSIVG LSSFAPGKPL TAIFKKTNGS KVEVTLNHTF NEQQIEWFKA GSALNRMKEV 660
  661 FAKSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 5acnA
Description: STRUCTURE OF ACTIVATED ACONITASE. FORMATION OF THE (4FE-4S) CLUSTER IN THE CRYSTAL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aconitate hydratase activity 4.91219496433532 bayes_pls_golite062009
catalytic activity 2.77447238073741 bayes_pls_golite062009
hydro-lyase activity 2.59723655295015 bayes_pls_golite062009
carbon-oxygen lyase activity 2.42042556122269 bayes_pls_golite062009
lyase activity 1.70481477411474 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle