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View Structure Prediction Details

Protein: CE30438
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30438.

Description E-value Query
Range
Subject
Range
gi|114588738 - gi|114588738|ref|XP_001151831.1| PREDICTED: protein disulfide isomerase-associated 5 [Pan troglodyte...
228.0 [0..21] [363..315]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSSFLTLI TVSVIFLVFL STHVDAKKKD KNLKVTVADD VAPPAPAKKS KKSAVKEAPA  60
   61 PPPKALSSKH 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.045757
Match: 1bjxA
Description: HUMAN PROTEIN DISULFIDE ISOMERASE, NMR, 24 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [71-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDDDNSIDDV DEDRIDEILR DASKNLVIFL YDGKVPCPTC TEALSEVEEI DDDIEATGYV  60
   61 QVVKTNDRSV ARELGINVFP SLVYYRRKNP ILYDGDFKDS ETLLRWLRAH EEVATWDLTD 120
  121 DTFESRTDSH SPDEGSIDWF VMFYDADEGN SNAFVPLWET VAHKLRGLVN VGKIEISVND 180
  181 DVTERFHIEE RDCPVFLLFH RGKMYRYKES AKDARSLTNF ALHKYKEQRG HRVPEPPTAI 240
  241 EQVYEFAKEK IMDIMDDNQT LSVLGVGGLI VIVAVTLIIK AYRIRAENKN KVA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle