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View Structure Prediction Details

Protein: CE30492
Organism: Caenorhabditis elegans
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30492.

Description E-value Query
Range
Subject
Range
gi|39580420, gi|... - gi|39580420|emb|CAE69302.1| Hypothetical protein CBG15357 [Caenorhabditis briggsae], gi|187027186|em...
80.0 [0..4] [44..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVCEKRID SVVASAVEGS GMFYAVRFEP PPSKTCFDVT LKTYGPPYTE YIVTVAIPPK  60
   61 FPFSPPAITC KTDKNMKFLF LEENQWKPST GIVAVLIEAC SVISRRDLVP RAPVLPRIRP 120
  121 PQARTPTSAS PAKSPQKAD

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.95
Match: 1ylaA
Description: Ubiquitin-conjugating enzyme E2-25 kDa (Huntington interacting protein 2)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.313907187568717 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle