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View Structure Prediction Details

Protein: CE30066
Organism: Caenorhabditis elegans
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE30066.

Description E-value Query
Range
Subject
Range
gi|157749385 - gi|157749385|ref|XP_001678406.1| Hypothetical protein CBG03677 [Caenorhabditis briggsae AF16]
gi|187036417, gi... - gi|39595095|emb|CAE60132.1| Hypothetical protein CBG03677 [Caenorhabditis briggsae], gi|187036417|em...
312.0 [0..15] [219..10]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQKEHASAL EKLRVIWLHK KKIEAELQSR HAESTKFLSK IKLKESEIYG LKTKQETCQK  60
   61 ELTDCQTLKE EPKEQKKENN KNDENSKKTI EKYEQEIAGL KEKIEGLEEK VKNNYSDENS 120
  121 SLKEELKQCE TRIRQLTGGG AIEHYSQNET AHFSRNQKAD EPLFFDRGNI QHHIPQKLLL 180
  181 GRELVQTLEE AKVKKLEERE QMDKHPQDRD NKDKEVNEQP DNEEQDYKEH 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.08
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle