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View Structure Prediction Details

Protein: mps-3
Organism: Caenorhabditis elegans
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mps-3.

Description E-value Query
Range
Subject
Range
gi|116095803, gi... - gi|116630221|ref|YP_815393.1| hypothetical protein LGAS_1663 [Lactobacillus gasseri ATCC 33323], gi|...
122.0 [0..7] [164..2208]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTQRPPA PTSGSSSTPW TKVVIFIIIG ILIVAFIVFA AASIVKYIKS KKQQKQPKKK  60
   61 TKKSTKSRSK SLKSKQSAVT PKKRASPIPP QPAPPSSPKP TEESATPSSS FAPSTEPTPT 120
  121 VPDKVDDGSE DTEHKEQEQQ TVLCTYGNGW KSKNQPPHDF SFSIESE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.45
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle