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View Structure Prediction Details

Protein: acdh-2
Organism: Caenorhabditis elegans
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-2.

Description E-value Query
Range
Subject
Range
gi|106893170, gi... - gi|158319150|ref|YP_001511657.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus orem...
289.0 [0..2] [214..138]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTVAKKDGD HFILNGSKWG ISNAPIADFF LVLANADPEK GYRGVTCFIV DRDHEGVVLG  60
   61 EQDDNLGMRA GTIAQVHLNS VRVPKTSIVG EYGKGYKYAI EVLNASRIVI GAQMGLQHQI 120
  121 AKIQTEIEAA RLMVYNCARM KDCGMPFVKE ASMAKYYAPE VACKTTKQCI EWLGGVGFTK 180
  181 NFMAEKFYRD AVVGGIYEGT SNIQLNTIAK FIDNEFKHRI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 2jifA
Description: No description for 2jifA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle