YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: acdh-2
Organism: Caenorhabditis elegans
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-2.

Description E-value Query
Range
Subject
Range
gi|106893170, gi... - gi|158319150|ref|YP_001511657.1| acyl-CoA dehydrogenase domain-containing protein [Alkaliphilus orem...
306.0 [0..10] [301..76]

Back

Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKVPRKLPI SAISTFSTTG SISAQQQPRV FPLQHLNENE KKLVEKVKNF AQSSVKPLVR  60
   61 EMDRDARINK QLLKKAFDLK LMGLKIDPKL APSHFRKLYL DPMHSQCKQS PKKMETTSFS 120
  121 TDQNGESVMH RLLIFSLFLQ MRILRKDTED DNLGMRAGTI AQVHLNSVRV PKTSIVGEYG 180
  181 KGYKYAIEVL NASRIVIGAQ MGLQHQIAKI QTEIEAARLM VYNCARMKDC GMPFVKEASM 240
  241 AKYYAPEVAC KTTKQCIEWL GGVGFTKNFM AEKFYRDAVV GGIYEGTSNI QLNTIAKFID 300
  301 NEFKHRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 73.0
Match: 2jifA
Description: No description for 2jifA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle