YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE29133
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE29133.

Description E-value Query
Range
Subject
Range
gi|90437671, gi|... - gi|90581150|ref|ZP_01236949.1| ATP synthase subunit C [Vibrio angustum S14], gi|90437671|gb|EAS62863...
309.0 [0..25] [282..1]

Back

Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRQGAGTLQ LVSQGFANAE QARGFATLKD ISIRLKSVKN IQKITKSMKM VAAAKYAKAE  60
   61 RELKGARAYG VGAKTFFDNI DPVVEGVEKQ ESKKQVLVLI TSDRGLCGGV HSSIVKEAKN 120
  121 ILNNAGDKEI RVVAIGDKSR AGLQRLYANS ILLSGNEIGR APPSFADASI AAKAILDSGY 180
  181 DFETGTILFN RFKTVVSYET SKLQILPLEA IKAKEALSTY DSVDDDVLQS YSEYSLAQLI 240
  241 YYGMKESATS ELPASKYLSL SVPFLHPLLF KLSLFRRPNF PHFKSFLSPP KIRCFDLFFI 300
  301 FLCVTRCYSD TFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.221849
Match: 2jdiG
Description: No description for 2jdiG was found.

Predicted functions:

Term Confidence Notes
hydrogen ion transporting ATP synthase activity, rotational mechanism 0.172261361455004 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle