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View Structure Prediction Details

Protein: lon-1
Organism: Caenorhabditis elegans
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lon-1.

Description E-value Query
Range
Subject
Range
lon-1 - status:Confirmed UniProt:Q09566 protein_id:AAC46538.1
226.0 [0..1] [301..1]

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Predicted Domain #1
Region A:
Residues: [1-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLTALIA LLAPISVAYN VPHGFLTGEA VTSHSGPNDL DGELPATDEV KREKRGYFFP  60
   61 SHFQSDSGLL SRSEHPNEYL KKWITHEHNR YRRMVPASDM NMLYWSDELA ASAQRHADTC 120
  121 DFRHSRGRIN VGENIWAAPY SNYSDAISIW FNEVHNPRCG CNHAYKHCCG HYVQVVWAKT 180
  181 NLVGCGFSRC RDVQGVWGRG HRNVFVCHYN PQGNTMPAFT WASGDNGKCS NCPANAPACY 240
  241 QGLCYMPKNY EAPTTTTEST TTSTTTEEPT TTCEPDEPEA EGADNNQEEE EENNDGFRMR 300
  301 V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1xtaA
Description: Crystal Structure of Natrin, a snake venom CRISP from Taiwan cobra (Naja atra)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle