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View Structure Prediction Details

Protein: rnh-2
Organism: Caenorhabditis elegans
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rnh-2.

Description E-value Query
Range
Subject
Range
gi|187035517, gi... - gi|39590015|emb|CAE61013.1| Hypothetical protein CBG04751 [Caenorhabditis briggsae], gi|187035517|em...
gi|157765364 - gi|157765364|ref|XP_001675025.1| Hypothetical protein CBG04751 [Caenorhabditis briggsae AF16]
318.0 [0..1] [297..1]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKCETERS KTWNNFGNGI PCVLGIDEAG RGPVLGPMVY AAAISPLDQN VELKNLGVDD  60
   61 SKALNEAKRE EIFNKMNEDE DIQQIIAYAL RCLSPELISC SMLKRQKYSL NEVSHEAAIT 120
  121 LIRDALACNV NVVEIKVDTV GPKATYQAKL EKLFPGISIC VTEKADSLFP IVSAASIAAK 180
  181 VTRDSRLRNW QFREKNIKVP DAGYGSGYPG DPNTKKFLQL SVEPVFGFCS LVRSSWKTAS 240
  241 TIVEKRCVPG SWEDDEEEGK SQSKRMTSWM VPKNETEVVP KRNVYFKERH MSNILTF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 2dfeA
Description: No description for 2dfeA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle